PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0103s0009.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Trihelix
Protein Properties Length: 356aa    MW: 38079.6 Da    PI: 9.7026
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0103s0009.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix67.82.2e-2143134187
             trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdql 85 
                          +W+++e+ aLi+a+r+++ +lrrg+lk+ +W+ev++++          ++++qC++k+e+l+kry+ + +++++   s+ +s++++f+++
  Kaladp0103s0009.1.p  43 CWSHDETIALIDAYRDKWYSLRRGNLKAFHWQEVADAVagrcPLASPAKTAVQCRHKMEKLRKRYRSEIQRARSMpVSRFTSSWVHFKRM 132
                          8*************************************76553444589*************************97799*********** PP

             trihelix  86 ea 87 
                          +a
  Kaladp0103s0009.1.p 133 DA 134
                          85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138377.8E-2242135No hitNo description
SMARTSM005951.8E-1351140IPR006578MADF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    Send to blast
MAGSPPSPHP DDSNAHHSPP PSQPPQQAQP TSQPSSRRLP PPCWSHDETI ALIDAYRDKW  60
YSLRRGNLKA FHWQEVADAV AGRCPLASPA KTAVQCRHKM EKLRKRYRSE IQRARSMPVS  120
RFTSSWVHFK RMDAMEKGPT LAKPVDDSAS DEDNDDEDDA ELEGYEFPDV GRYGRNGGSG  180
GKAGFGLVGN GVGGSGSGGG YSGGGGGGFR IKIPNGVSIA KPGSGFRSKG HGKYDDLPTA  240
SPNLGPLAAR DGYWKGSGGS RAGGGAGAGG SGSGKREREG DAVSEMVAAI NMLADGFVKT  300
EQKKMEMARE IEVMRMDMET KRLKMILESQ ERVMEAFTKA TSDKKKPKRM AASPE*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012475374.11e-121PREDICTED: trihelix transcription factor ASIL2
TrEMBLA0A0D2S0Z51e-121A0A0D2S0Z5_G
STRINGPOPTR_0014s05010.13e-98(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.11e-54Trihelix family protein